Gallery

Computational chemistry visualisations.

Four FFMSIRFF peptides on a POPC membrane

Four FFMSIRFF peptides on a POPC membrane

Molecular dynamics snapshot of four peptides interacting with a POPC lipid bilayer. Tachyon render showing aqueous phase as transparent QuickSurf projection.

FmocFF nanotube undergoing syneresis

FmocFF nanotube undergoing syneresis

FmocFF is known to form nanotubes at ca. pH 4-7 which undergo syneresis (collapse by squeezing water out, like old yoghurt) at elevated pH. We simulated this using constant pH molecular dynamics; the beads show green (deprotonated) and red (protonated) C-termini of FmocFF. The presence of Fmoc and the 3D structure cause the apparent pKa of the C-termini to shift substantially.

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Peptide sequence space volume

Peptide sequence space volume

Planetary orbs accurately scaled by volume representing the different sizes of peptide data sets from 2 to 7 amino acid residues.

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Nickle Nanoparticle

Nickle Nanoparticle

Nickle Nanoparticle encapsulated in a reverse micremulsion of TX-100/hexanmol. This image was taken with a TEM in Bristol University, fond memories of cold dark days in that room peering into atomic level structures.

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Non-covalent Interactions

Non-covalent Interactions

Hydrocarbon Soluble Alkali-Metal-Aluminium Complex.

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bio:cap 2026 promotional video.

Made with Kdenlive + OBS + facebook musicgen model.

Tripeptide crystal.

Tripeptide crystal.

Peptide crystals that open and close depending on the humidity and pH.

Nipah virus Glycoprotein G (NiV-G)

Nipah virus Glycoprotein G (NiV-G)

First time using Blender. Well, Mol* exported to Blender.

AI

AI

The only non-AI generated image on this website.